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Plot the regression model generated by the function ge_reg.

Usage

# S3 method for ge_reg
plot(
  x,
  var = 1,
  type = 1,
  plot_theme = theme_metan(),
  x.lim = NULL,
  x.breaks = waiver(),
  x.lab = NULL,
  y.lim = NULL,
  y.breaks = waiver(),
  y.lab = NULL,
  leg.position = "right",
  size.tex.lab = 12,
  ...
)

Arguments

x

An object of class ge_factanal

var

The variable to plot. Defaults to var = 1 the first variable of x.

type

The type of plot to show. type = 1 produces a plot with the environmental index in the x axis and the genotype mean yield in the y axis. type = 2 produces a plot with the response variable in the x axis and the slope/deviations of the regression in the y axis.

plot_theme

The graphical theme of the plot. Default is plot_theme = theme_metan(). For more details, see ggplot2::theme().

x.lim

The range of x-axis. Default is NULL (maximum and minimum values of the data set). New arguments can be inserted as x.lim = c(x.min, x.max).

x.breaks

The breaks to be plotted in the x-axis. Default is authomatic breaks. New arguments can be inserted as x.breaks = c(breaks)

x.lab

The label of x-axis. Each plot has a default value. New arguments can be inserted as x.lab = "my label".

y.lim

The range of x-axis. Default is NULL. The same arguments than x.lim can be used.

y.breaks

The breaks to be plotted in the x-axis. Default is authomatic breaks. The same arguments than x.breaks can be used.

y.lab

The label of y-axis. Each plot has a default value. New arguments can be inserted as y.lab = "my label".

leg.position

The position of the legend.

size.tex.lab

The size of the text in the axes text and labels. Default is 12.

...

Currently not used..

Value

An object of class gg, ggplot.

See also

Author

Tiago Olivoto tiagoolivoto@gmail.com

Examples

# \donttest{
library(metan)
model <- ge_reg(data_ge2, ENV, GEN, REP, PH)
#> Evaluating trait PH |============================================| 100% 00:00:00 

plot(model)

# }